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sdhB protein (Pelagibaca bermudensis) - STRING interaction network
"sdhB" - Succinate dehydrogenase iron-sulfur subunit in Pelagibaca bermudensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sdhBSuccinate dehydrogenase iron-sulfur subunit (259 aa)    
Predicted Functional Partners:
R2601_10759
Succinate dehydrogenase flavoprotein subunit (601 aa)
  0.999
R2601_10769
Succinate dehydrogenase cytochrome b-556 subunit (131 aa)
 
  0.999
R2601_09183
3-ketosteroid dehydrogenase, putative (454 aa)
   
  0.999
R2601_01548
Putative dehydrogenase (569 aa)
   
  0.998
R2601_10764
Succinate dehydrogenase, hydrophobic membrane anchor protein (123 aa)
 
  0.993
R2601_23208
Cytochrome-c oxidase chain II/c (319 aa)
     
  0.990
R2601_09832
Ubiquinol-cytochrome c reductase iron-sulfur subunit ; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (191 aa)
 
  0.987
R2601_13049
Cytochrome o ubiquinol oxidase subunit II (377 aa)
     
  0.986
R2601_13069
Cytochrome o ubiquinol oxidase subunit IV (127 aa)
     
 
  0.984
R2601_13064
Cytochrome c oxidase, subunit III (219 aa)
     
 
  0.983
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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