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mdh protein (Pelagibaca bermudensis) - STRING interaction network
"mdh" - Malate dehydrogenase in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mdhMalate dehydrogenase ; Catalyzes the reversible oxidation of malate to oxaloacetate (320 aa)    
Predicted Functional Partners:
R2601_25256
Citrate synthase (432 aa)
   
  0.999
fumC
Fumarate hydratase class II (464 aa)
   
  0.998
sucC
Succinyl-CoA synthetase subunit beta (397 aa)
   
  0.998
R2601_19959
Citrate synthase (259 aa)
   
  0.996
glcB
Malate synthase G ; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA (715 aa)
     
 
  0.982
R2601_19502
Propionyl-CoA carboxylase, beta subunit (510 aa)
   
 
  0.981
R2601_10759
Succinate dehydrogenase flavoprotein subunit (601 aa)
 
  0.978
R2601_16765
Pyruvate kinase (478 aa)
   
  0.976
R2601_14750
NADP-dependent malic enzyme (751 aa)
 
  0.972
R2601_12990
Glutamate synthase, large subunit (1537 aa)
   
 
  0.971
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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