STRINGSTRING
sucC protein (Pelagibaca bermudensis) - STRING interaction network
"sucC" - Succinyl-CoA synthetase subunit beta in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sucCSuccinyl-CoA synthetase subunit beta (397 aa)    
Predicted Functional Partners:
R2601_10824
Succinyl-CoA ligase [ADP-forming] subunit alpha (294 aa)
  0.999
mdh
Malate dehydrogenase ; Catalyzes the reversible oxidation of malate to oxaloacetate (320 aa)
   
  0.998
R2601_10829
2-oxoglutarate dehydrogenase, E1 component (990 aa)
 
  0.997
R2601_10834
2-oxoglutarate dehydrogenase complex component E2 ; The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) (512 aa)
 
  0.989
R2601_10759
Succinate dehydrogenase flavoprotein subunit (601 aa)
 
  0.987
R2601_12540
Beta subunit of citrate lyase (319 aa)
       
  0.984
R2601_08381
Acetyltransferase component of pyruvate dehydrogenase complex ; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) (446 aa)
   
  0.982
R2601_25256
Citrate synthase (432 aa)
   
  0.981
sdhB
Succinate dehydrogenase iron-sulfur subunit (259 aa)
 
  0.970
R2601_14750
NADP-dependent malic enzyme (751 aa)
   
 
  0.963
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (8%) [HD]