STRINGSTRING
tauB protein (Pelagibaca bermudensis) - STRING interaction network
"tauB" - Taurine import ATP-binding protein TauB in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tauBTaurine import ATP-binding protein TauB ; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system (258 aa)    
Predicted Functional Partners:
R2601_10899
Taurine ABC transporter, permease protein (421 aa)
 
  0.999
R2601_10909
Taurine ABC transporter, periplasmic taurine-binding protein (331 aa)
 
 
  0.999
R2601_21562
ABC transporter permease protein (277 aa)
 
  0.932
R2601_02393
Binding-protein-dependent transport systems inner membrane component (256 aa)
 
  0.798
R2601_08166
ABC-type nitrate/sulfonate/bicarbonate transport system (360 aa)
 
  0.779
R2601_02448
Putative transporter (282 aa)
 
  0.755
R2601_11789
ABC transporter, permease protein (279 aa)
 
  0.752
R2601_05193
Probable permease of ABC transporter (523 aa)
 
 
  0.724
R2601_20129
ABC transporter, inner membrane subunit (254 aa)
 
  0.720
R2601_04803
Putative ABC transporter protein (267 aa)
 
  0.706
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (21%) [HD]