STRINGSTRING
amn protein (Pelagibaca bermudensis) - STRING interaction network
"amn" - AMP nucleosidase in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amnAMP nucleosidase ; Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations (494 aa)    
Predicted Functional Partners:
ade
Adenine deaminase (565 aa)
 
   
    0.863
R2601_26661
Adenylate kinase ; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP (228 aa)
         
  0.810
R2601_09265
Adenylate kinase ; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP (192 aa)
         
  0.810
R2601_24285
Predicted pyrophosphatase (278 aa)
       
  0.808
R2601_21997
Adenylosuccinase (434 aa)
   
 
    0.797
deoD
Purine nucleoside phosphorylase DeoD-type (234 aa)
         
  0.792
surE
Nucleoside 5’-monophosphate phosphohydrolase ; Nucleotidase that shows phosphatase activity on nucleoside 5’-monophosphates (261 aa)
       
  0.790
R2601_25311
Inosine-uridine preferring nucleoside hydrolase (312 aa)
         
  0.787
R2601_24265
Malonyl CoA-acyl carrier protein transacylase (313 aa)
   
        0.669
R2601_17883
5’-methylthioadenosine phosphorylase (291 aa)
       
  0.638
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (7%) [HD]