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R2601_10939 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_10939" - Branched-chain amino acid aminotransferase in Pelagibaca bermudensis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
R2601_10939Branched-chain amino acid aminotransferase (289 aa)    
Predicted Functional Partners:
ilvD
Dihydroxy-acid dehydratase (609 aa)
   
  0.996
R2601_05743
Dihydroxy-acid dehydratase protein (581 aa)
   
  0.996
R2601_05298
Dihydroxy-acid dehydratase (598 aa)
   
  0.996
R2601_01718
Dihydroxy-acid dehydratase (577 aa)
   
  0.996
R2601_10834
2-oxoglutarate dehydrogenase complex component E2 ; The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) (512 aa)
   
  0.982
leuA
Alpha-isopropylmalate synthase ; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) (521 aa)
 
  0.939
R2601_23775
2-isopropylmalate synthase (545 aa)
   
  0.930
R2601_21647
Phosphogluconate dehydratase (601 aa)
   
  0.930
R2601_26746
Probable threonine dehydratase protein (338 aa)
   
 
  0.928
ilvA
Threonine deaminase ; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA (414 aa)
   
 
  0.928
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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