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xseB protein (Pelagibaca bermudensis) - STRING interaction network
"xseB" - Exodeoxyribonuclease VII small subunit in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
xseBExodeoxyribonuclease VII small subunit ; Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides (80 aa)    
Predicted Functional Partners:
xseA
Exodeoxyribonuclease VII large subunit ; Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides (510 aa)
 
  0.979
R2601_10964
Geranylgeranyl pyrophosphate synthetase (289 aa)
   
        0.968
R2601_10954
Histone deacetylase family protein (308 aa)
         
  0.889
dxs
1-deoxyxylulose-5-phosphate synthase ; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) (641 aa)
   
   
  0.867
R2601_11886
Decaprenyl diphosphate synthase (331 aa)
   
        0.786
R2601_10949
DNA-binding response regulator PetR (233 aa)
   
        0.664
R2601_10944
Transcriptional regulator PetP (170 aa)
              0.661
R2601_07786
N utilization substance protein B homolog ; Involved in the transcription termination process (163 aa)
   
        0.568
R2601_08246
Recombination protein N ; May be involved in recombinational repair of damaged DNA (553 aa)
   
   
  0.530
R2601_23318
Inosine-5’-monophosphate dehydrogenase (482 aa)
   
        0.505
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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