STRINGSTRING
R2601_11049 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_11049" - UPF0434 protein R2601_11049 in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_11049UPF0434 protein R2601_11049 (65 aa)    
Predicted Functional Partners:
R2601_11054
ATP-dependent protease La domain protein (215 aa)
              0.887
R2601_11059
Thioredoxin (305 aa)
              0.828
R2601_11044
Uncharacterized protein (77 aa)
              0.585
R2601_11064
Metal-dependent hydrolase (223 aa)
              0.521
cls
Cardiolipin synthetase ; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol (473 aa)
              0.497
lpxK
Lipid A 4’-kinase ; Transfers the gamma-phosphate of ATP to the 4’-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4’-bis-phosphate (lipid IVA) (329 aa)
   
        0.462
R2601_19185
Low molecular weight phosphotyrosine protein phosphatase (151 aa)
   
        0.461
purA
IMP--aspartate ligase ; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP (431 aa)
              0.451
R2601_26661
Adenylate kinase ; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP (228 aa)
              0.451
R2601_25246
Competence protein (678 aa)
              0.451
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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