STRINGSTRING
R2601_11059 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_11059" - Thioredoxin in Pelagibaca bermudensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_11059Thioredoxin (305 aa)    
Predicted Functional Partners:
R2601_11054
ATP-dependent protease La domain protein (215 aa)
   
        0.832
R2601_11049
UPF0434 protein R2601_11049 (65 aa)
              0.828
R2601_27091
Transcriptional regulator, DeoR family protein (255 aa)
       
      0.653
R2601_17469
Putative transcription regulator protein (283 aa)
       
      0.653
R2601_13404
Uncharacterized protein (279 aa)
       
      0.653
R2601_13344
Transcriptional regulator, DeoR family protein (257 aa)
       
      0.653
R2601_12855
Probable glycerol-3-phosphate regulon repressor (255 aa)
       
      0.653
R2601_00980
Bacterial regulatory protein, DeoR family (255 aa)
       
      0.653
dnaJ
Chaperone protein DnaJ ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] (385 aa)
 
        0.615
R2601_15317
Thioredoxin (146 aa)
 
 
 
0.592
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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