STRINGSTRING
cls protein (Pelagibaca bermudensis) - STRING interaction network
"cls" - Cardiolipin synthetase in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clsCardiolipin synthetase ; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol (473 aa)    
Predicted Functional Partners:
R2601_11064
Metal-dependent hydrolase (223 aa)
 
        0.904
R2601_18003
Putative phospholipase D protein (514 aa)
 
 
0.838
R2601_21582
Putative phospholipase D protein (525 aa)
 
 
0.835
psd
Phosphatidylserine decarboxylase proenzyme ; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) (226 aa)
   
  0.829
R2601_26276
Phosphatidylglycerolphosphate phosphatase A ; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) (161 aa)
     
    0.785
R2601_11074
Exodeoxyribonuclease III, putative (262 aa)
   
        0.678
R2601_12925
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (82 aa)
 
  0.669
R2601_25091
Phosphatidate cytidylyltransferase (262 aa)
   
 
  0.644
R2601_23318
Inosine-5’-monophosphate dehydrogenase (482 aa)
       
  0.622
R2601_11329
Uncharacterized protein (202 aa)
   
  0.601
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (10%) [HD]