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R2601_11089 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_11089" - D-alanyl-D-alanine carboxypeptidase family protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
R2601_11089D-alanyl-D-alanine carboxypeptidase family protein (486 aa)    
Predicted Functional Partners:
R2601_12995
Monofunctional biosynthetic peptidoglycan transglycosylase ; Cell wall formation (221 aa)
       
  0.980
R2601_21126
Penicillin-binding protein (596 aa)
 
 
  0.938
R2601_10639
Beta-lactamase (625 aa)
   
 
  0.909
murG
Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase ; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) (377 aa)
     
  0.838
R2601_21547
Penicillin-binding protein 1A (845 aa)
       
  0.837
infB
Translation initiation factor IF-2 ; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (822 aa)
     
      0.830
R2601_19609
D-alanyl-D-alanine carboxypeptidase (391 aa)
   
   
 
0.828
R2601_12950
Penicillin-binding protein, 1A family (727 aa)
       
  0.818
R2601_20366
N-carbamyl-D-amino acid amidohydrolase (302 aa)
   
 
    0.775
R2601_11704
Membrane-bound lytic murein transglycosylase B (415 aa)
 
   
  0.719
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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