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R2601_11184 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_11184" - Sugar ABC transporter, permease protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_11184Sugar ABC transporter, permease protein (321 aa)    
Predicted Functional Partners:
R2601_11189
Sugar ABC transporter, permease protein (364 aa)
 
 
0.998
R2601_11194
Sugar ABC transporter, ATP-binding protein (532 aa)
 
 
  0.980
R2601_10339
ABC transporter, inner membrane subunit (361 aa)
 
 
  0.975
R2601_11199
Sugar ABC transporter, periplasmic sugar-binding protein (334 aa)
 
 
  0.959
R2601_16495
Putative ABC sugar transporter, inner membrane subunit (348 aa)
 
 
  0.959
R2601_07896
Probable sugar ABC transporter, permease protein (357 aa)
 
 
  0.958
R2601_16500
Putative ABC sugar transporter, fused ATPase subunits (513 aa)
 
 
  0.953
R2601_10344
Sugar ABC transporter, ATP-binding protein (507 aa)
 
 
  0.952
R2601_07901
Probable sugar ABC transporter, ATP-binding protein (503 aa)
 
 
  0.951
R2601_16505
Possible ABC transporter, periplasmic binding protein (343 aa)
 
 
  0.829
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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