STRINGSTRING
R2601_11269 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_11269" - ParA family protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_11269ParA family protein (224 aa)    
Predicted Functional Partners:
R2601_23670
Cobalt chelatase, pCobT subunit (625 aa)
     
 
    0.979
R2601_05898
Precorrin-8X methylmutase (209 aa)
         
    0.977
R2601_05888
Cobaltochelatase (1099 aa)
         
    0.977
R2601_23680
Cobalt chelatase, CobS small subunit (327 aa)
   
 
    0.794
R2601_07458
Cobyrinic acid a,c-diamide synthase (246 aa)
   
          0.720
R2601_14710
Chromosome partitioning protein ParA (269 aa)
   
          0.715
R2601_14715
Chromosome partitioning protein parB (303 aa)
 
 
  0.710
R2601_07453
Chromosome partitioning protein, ParB (346 aa)
 
 
  0.703
R2601_11264
Uncharacterized protein (280 aa)
              0.681
R2601_11274
Uncharacterized protein (223 aa)
              0.642
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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