STRINGSTRING
modC protein (Pelagibaca bermudensis) - STRING interaction network
"modC" - Molybdenum import ATP-binding protein ModC in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
modCMolybdenum import ATP-binding protein ModC ; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system (366 aa)    
Predicted Functional Partners:
R2601_11339
ABC transporter, substrate binding protein (Molybdate) (256 aa)
 
 
  0.999
R2601_11344
Molybdate transport permease protein (230 aa)
 
  0.997
R2601_11334
Molybdenum-binding transcriptional regulator, ModE family protein (131 aa)
         
  0.763
ccmA
Heme exporter protein A ; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system (204 aa)
 
   
    0.678
znuC
Zinc import ATP-binding protein ZnuC ; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system (259 aa)
 
   
 
0.652
R2601_17549
Probable ATP-binding component of ABC transporter (341 aa)
   
 
 
0.641
R2601_21667
Iron ABC transporter, ATP-binding protein, putative (359 aa)
   
 
 
0.636
R2601_02583
ABC transporter, ATP-binding protein (350 aa)
   
 
 
0.636
pstB
Phosphate-transporting ATPase ; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system (265 aa)
 
   
 
0.636
lolD
Lipoprotein-releasing system ATP-binding protein LolD ; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner (227 aa)
   
   
 
0.632
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (8%) [HD]