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R2601_11424 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_11424" - Transcriptional regulator, LuxR family protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_11424Transcriptional regulator, LuxR family protein (267 aa)    
Predicted Functional Partners:
R2601_11394
Uncharacterized protein (454 aa)
 
          0.786
R2601_11414
ABC putrescine transporter, inner membrane subunit (306 aa)
 
          0.681
psuG
Pseudouridine-5’-phosphate glycosidase ; Catalyzes the reversible cleavage of pseudouridine 5’- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway (305 aa)
       
    0.660
R2601_11404
Putrescine-binding periplasmic protein ; Required for the activity of the bacterial periplasmic transport system of putrescine (341 aa)
 
          0.655
R2601_11409
Probable permease of ABC transporter (268 aa)
   
        0.646
R2601_11399
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (255 aa)
 
 
      0.644
R2601_11419
Probable ATP-binding component of ABC transporter (355 aa)
              0.632
R2601_25021
DNA-binding response regulator, LuxR family protein (234 aa)
     
  0.598
R2601_21622
DNA-binding response regulator, LuxR family protein (214 aa)
     
  0.598
R2601_18503
Response regulator (119 aa)
     
  0.598
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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