STRINGSTRING
R2601_11444 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_11444" - Flagellar motor protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_11444Flagellar motor protein (634 aa)    
Predicted Functional Partners:
R2601_14580
Flagellar motor protein (289 aa)
   
  0.981
R2601_00340
Flagellar motor protein (298 aa)
   
  0.981
R2601_11449
Uncharacterized protein (410 aa)
 
          0.971
R2601_09415
Chemotaxis protein (154 aa)
 
   
  0.823
R2601_09410
Chemotaxis histidine protein kinase, CheA1 (716 aa)
   
   
  0.817
R2601_14605
Chemotaxis protein MotB (277 aa)
         
  0.802
R2601_11454
Cation transport protein ChaC, putative (180 aa)
 
          0.794
R2601_00365
OmpA/MotB (329 aa)
         
0.789
R2601_18715
Chemotaxis multidomain, CheB methylesterase/CheR, Methylase (1154 aa)
 
   
  0.754
R2601_14530
Flagellar basal-body rod protein FlgF (237 aa)
 
 
  0.746
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (7%) [HD]