STRINGSTRING
R2601_11449 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_11449" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_11449Uncharacterized protein (410 aa)    
Predicted Functional Partners:
R2601_11444
Flagellar motor protein (634 aa)
 
          0.971
R2601_11454
Cation transport protein ChaC, putative (180 aa)
              0.769
R2601_26926
Uncharacterized protein (1097 aa)
   
          0.715
R2601_15070
HemY domain protein (511 aa)
   
          0.688
R2601_13644
Uncharacterized protein (679 aa)
   
          0.688
R2601_11299
Uncharacterized protein (141 aa)
   
          0.674
R2601_12473
Uncharacterized protein (342 aa)
   
          0.662
R2601_10314
Uncharacterized protein (143 aa)
   
          0.654
R2601_23368
Uncharacterized protein (75 aa)
   
          0.642
R2601_09250
Uncharacterized protein (81 aa)
   
          0.642
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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