STRINGSTRING
R2601_11459 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_11459" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_11459Uncharacterized protein (309 aa)    
Predicted Functional Partners:
R2601_08686
Uncharacterized protein (116 aa)
   
          0.757
R2601_10479
Uncharacterized protein (249 aa)
   
          0.719
R2601_23485
Uncharacterized protein (250 aa)
   
          0.700
R2601_13239
CAAX amino terminal protease family protein (295 aa)
   
          0.699
R2601_15065
Uncharacterized protein (500 aa)
   
          0.695
R2601_11464
Probable succinyl-diaminopimelate desuccinylase (454 aa)
              0.692
R2601_09772
Uncharacterized protein (216 aa)
   
          0.679
R2601_08331
Uncharacterized protein (63 aa)
   
          0.676
R2601_11454
Cation transport protein ChaC, putative (180 aa)
              0.671
R2601_08591
Uncharacterized protein (177 aa)
   
          0.670
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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