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R2601_11524 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_11524" - Capsular polysaccharide export ATP-binding protein in Pelagibaca bermudensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_11524Capsular polysaccharide export ATP-binding protein (219 aa)    
Predicted Functional Partners:
R2601_11519
Capsular polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family (600 aa)
 
 
  0.996
R2601_18328
Polysaccharide biosynthesis/export protein (383 aa)
 
 
  0.916
R2601_14625
Putative capsule polysaccharide exporter (363 aa)
 
 
  0.896
R2601_18333
Capsular polysaccharide export protein KpsS (430 aa)
 
     
  0.864
R2601_18323
Capsular polysaccharide export protein KpsC (709 aa)
 
     
  0.826
R2601_15567
ABC transporter, permease protein (276 aa)
   
          0.764
R2601_18568
Uncharacterized protein (293 aa)
   
          0.759
R2601_26181
Uncharacterized protein (419 aa)
 
          0.757
R2601_15527
Uncharacterized protein (475 aa)
   
          0.749
R2601_13614
EpsK domain protein (525 aa)
   
          0.749
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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