STRINGSTRING
R2601_11679 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_11679" - Putative aminotransferase in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_11679Putative aminotransferase (392 aa)    
Predicted Functional Partners:
R2601_08903
O-succinylhomoserine sulfhydrylase (392 aa)
       
  0.988
R2601_27141
Dihydropteroate synthase, DHPS-Homocysteine S-methyltransferase-Cobalamin-dependent methionine (1256 aa)
         
  0.982
R2601_25191
Corrinoid methyltransferase protein, putative (234 aa)
       
    0.977
R2601_25181
Methionine synthase I (337 aa)
         
    0.977
R2601_25361
O-acetylserine (Thiol)-lyase, cysteine synthase (342 aa)
       
  0.821
R2601_18950
Aspartate aminotransferase (400 aa)
 
   
0.805
R2601_27181
O-acetylhomoserine aminocarboxypropyltransferase (425 aa)
       
  0.795
R2601_16525
Sulfurtransferase (285 aa)
       
    0.784
R2601_12273
Probable Rhodanese-related sulfurtransferase (313 aa)
       
    0.784
R2601_17744
Glutamate--cysteine ligase (456 aa)
       
    0.784
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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