STRINGSTRING
R2601_11831 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_11831" - Dihydropyrimidine dehydrogenase in Pelagibaca bermudensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_11831Dihydropyrimidine dehydrogenase (434 aa)    
Predicted Functional Partners:
R2601_11836
Pyridine nucleotide-disulphide oxidoreductase family protein (426 aa)
  0.999
R2601_00595
Dihydropyrimidinase (469 aa)
  0.999
R2601_11809
Dihydropyrimidinase (484 aa)
  0.998
R2601_12975
Glutamate synthase, small subunit (478 aa)
  0.995
R2601_13925
Dihydroorotase (427 aa)
   
  0.991
R2601_09210
Binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein (692 aa)
   
 
  0.985
R2601_21962
N-methylhydantoinase A (Mikimopine-lactam hydrogenase) (702 aa)
         
    0.980
R2601_02093
Hydantoin utilization protein a (685 aa)
         
    0.980
R2601_00070
Hydantoin utilization protein A (HyuA) (710 aa)
         
    0.980
R2601_10759
Succinate dehydrogenase flavoprotein subunit (601 aa)
   
  0.976
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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