STRINGSTRING
R2601_11946 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_11946" - Putative lipoprotein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_11946Putative lipoprotein (237 aa)    
Predicted Functional Partners:
R2601_11951
Toluene tolerance family protein (200 aa)
 
          0.960
R2601_18433
Uncharacterized protein (149 aa)
 
     
  0.862
R2601_24225
ABC transporter, ATP-binding protein (255 aa)
 
     
  0.621
R2601_24235
Membrane protein (260 aa)
 
     
  0.598
bamD
Outer membrane protein assembly factor BamD ; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (275 aa)
 
          0.545
R2601_15727
ABC transporter, ATPase subunit (263 aa)
         
  0.521
R2601_15722
ABC transporter, inner membrane subunit (377 aa)
         
  0.520
R2601_14805
Hpt domain protein (111 aa)
   
          0.514
R2601_11936
Type I secretion membrane fusion protein, HlyD family (435 aa)
   
        0.513
R2601_11941
Type I secretion system ATPase (576 aa)
              0.509
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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