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R2601_12041 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_12041" - Gamma-glutamyltranspeptidase in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_12041Gamma-glutamyltranspeptidase (597 aa)    
Predicted Functional Partners:
R2601_13309
Gamma-glutamyltranspeptidase protein (555 aa)
   
   
 
0.845
R2601_18985
Bifunctional protein PutA ; Oxidizes proline to glutamate for use as a carbon and nitrogen source (1142 aa)
   
 
  0.844
R2601_12186
Gamma-glutamyltranspeptidase (601 aa)
   
   
 
0.844
R2601_12046
Xaa-Pro aminopeptidase (417 aa)
   
   
  0.843
R2601_24724
Glutamine synthetase (468 aa)
   
 
  0.841
R2601_19719
Gamma-glutamyltransferase (537 aa)
   
   
 
0.839
R2601_07941
Glutamine synthetase III (438 aa)
   
 
  0.839
R2601_15682
Gamma-glutamyltransferase (529 aa)
   
   
 
0.836
R2601_12036
Endoribonuclease L-PSP (117 aa)
   
        0.827
R2601_08978
Glutathione peroxidase (171 aa)
   
 
  0.823
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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