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R2601_12166 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_12166" - Mechanosensitive ion channel family protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
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Textmining
[Homology]
Score
R2601_12166Mechanosensitive ion channel family protein (453 aa)    
Predicted Functional Partners:
infB
Translation initiation factor IF-2 ; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (822 aa)
       
      0.801
R2601_26266
tRNA-dihydrouridine synthase ; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines (327 aa)
       
      0.743
dusA
tRNA-dihydrouridine synthase A ; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs (315 aa)
       
      0.688
R2601_12171
Beta-ketothiolase (392 aa)
              0.659
R2601_12161
Uncharacterized protein (39 aa)
              0.648
R2601_21447
Nodulation protein (453 aa)
     
      0.588
R2601_21251
Nodulation protein T (377 aa)
     
      0.588
R2601_17619
Type I secretion outer membrane protein, TolC family (468 aa)
     
      0.533
R2601_22367
Sulfite reductase, putative (557 aa)
     
      0.526
R2601_05893
CobG (378 aa)
     
      0.467
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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