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R2601_12243 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_12243" - FAD dependent oxidoreductase in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_12243FAD dependent oxidoreductase (304 aa)    
Predicted Functional Partners:
R2601_12226
Cyclopropane-fatty-acyl-phospholipid synthase (390 aa)
   
  0.943
R2601_12236
Probable dehydrogenase (85 aa)
 
          0.940
R2601_14245
Cyclopropane-fatty-acyl-phospholipid synthase (410 aa)
   
  0.882
R2601_12231
Putative cyclopropane/cyclopropene fatty acid synthesis protein (262 aa)
 
        0.876
R2601_12248
RNA polymerase sigma-70 factor (181 aa)
 
          0.792
R2601_12221
Uncharacterized protein (235 aa)
 
     
  0.791
R2601_12211
Uncharacterized protein (133 aa)
 
          0.774
R2601_12201
Deoxyribodipyrimidine photolyase-related protein (510 aa)
 
          0.744
R2601_12253
Uncharacterized protein (222 aa)
 
          0.697
R2601_25376
Deoxyribodipyrimidine photolyase (473 aa)
 
        0.644
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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