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R2601_12273 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_12273" - Probable Rhodanese-related sulfurtransferase in Pelagibaca bermudensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_12273Probable Rhodanese-related sulfurtransferase (313 aa)    
Predicted Functional Partners:
R2601_12268
Uncharacterized protein (378 aa)
 
        0.971
R2601_25361
O-acetylserine (Thiol)-lyase, cysteine synthase (342 aa)
   
 
  0.890
R2601_12263
Uncharacterized protein (54 aa)
              0.859
R2601_16525
Sulfurtransferase (285 aa)
   
   
 
0.844
R2601_26881
Putative aminotransferase (344 aa)
   
  0.842
R2601_09927
Molybdopterin biosynthesis protein MoeB, putative (348 aa)
   
  0.837
R2601_22367
Sulfite reductase, putative (557 aa)
 
 
  0.831
R2601_08903
O-succinylhomoserine sulfhydrylase (392 aa)
   
 
  0.829
R2601_27141
Dihydropteroate synthase, DHPS-Homocysteine S-methyltransferase-Cobalamin-dependent methionine (1256 aa)
       
  0.815
R2601_18950
Aspartate aminotransferase (400 aa)
     
 
  0.811
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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