STRINGSTRING
R2601_12358 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_12358" - Putative deaminase in Pelagibaca bermudensis
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
R2601_12358Putative deaminase (152 aa)    
Predicted Functional Partners:
pdxJ
Pyridoxine 5’-phosphate synthase ; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5’-phosphate (PNP) and inorganic phosphate (250 aa)
              0.865
acpS
4’-phosphopantetheinyl transferase AcpS ; Transfers the 4’-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein (134 aa)
              0.865
R2601_10414
Riboflavin biosynthesis protein RibD ; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate (350 aa)
   
 
    0.825
R2601_11831
Dihydropyrimidine dehydrogenase (434 aa)
   
 
    0.823
R2601_21957
Xanthine dehydrogenase family protein, small/large subunits (905 aa)
       
    0.821
R2601_20576
Alkaline phosphatase (2191 aa)
       
    0.821
guaA
Glutamine amidotransferase ; Catalyzes the synthesis of GMP from XMP (521 aa)
   
        0.773
R2601_18268
Uracil phosphoribosyltransferase ; Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate (165 aa)
   
 
    0.761
tmk
dTMP kinase ; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis (208 aa)
 
 
    0.749
R2601_23318
Inosine-5’-monophosphate dehydrogenase (482 aa)
   
        0.722
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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