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tolB protein (Pelagibaca bermudensis) - STRING interaction network
"tolB" - Protein TolB in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tolBProtein TolB ; Involved in the TonB-independent uptake of proteins (446 aa)    
Predicted Functional Partners:
R2601_12443
Peptidoglycan-associated lipoprotein (174 aa)
 
 
  0.997
R2601_12463
Proton transporter TolQ (231 aa)
 
 
  0.981
R2601_12458
Biopolymer transport protein, ExbD/TolR family (134 aa)
 
   
  0.925
R2601_09048
OmpA family protein (221 aa)
 
 
  0.862
R2601_12438
Uncharacterized protein (276 aa)
   
   
  0.843
R2601_26376
Outer membrane protein, OmpA/MotB family (674 aa)
   
 
  0.809
R2601_22157
OmpA/MotB domain protein (248 aa)
   
 
  0.809
R2601_17764
OmpA domain protein (637 aa)
   
 
  0.809
R2601_16665
OmpA domain protein (310 aa)
   
 
  0.809
R2601_15477
OmpA domain protein (221 aa)
   
 
  0.809
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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