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R2601_12528 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_12528" - Mandelate racemase/muconate lactonizing enzyme family protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_12528Mandelate racemase/muconate lactonizing enzyme family protein (329 aa)    
Predicted Functional Partners:
R2601_12535
Uncharacterized protein (333 aa)
          0.914
R2601_12523
Aminotransferase class IV , putative D-alanine aminotransferase (287 aa)
 
          0.837
R2601_13654
NLP/P60 family protein (276 aa)
 
          0.742
hpbD
(4R)-4-hydroxyproline betaine 2-epimerase; Catalyzes the 2-epimerization of trans-4-hydroxy-L- proline betaine (tHyp-B) to cis-4-hydroxy-D-proline betaine (cHyp- B). Is involved in a catabolic pathway that degrades tHyp-B to alpha-ketoglutarate. This pathway would permit the utilization of tHyp-B as a carbon and nitrogen source in the absence of osmotic stress, since tHyp-B functions as an osmolyte and is not catabolized when it is needed as osmoprotectant. To a lesser extent, can also catalyze the racemization of L-proline betaine (367 aa)
 
   
    0.741
R2601_15985
Adenylate/guanylate cyclase/hydrolase, alpha/beta fold family protein (507 aa)
   
 
  0.708
R2601_21291
Hydrolase, alpha/beta fold family protein (254 aa)
   
 
  0.693
R2601_20921
Uncharacterized protein (246 aa)
   
 
  0.693
R2601_14910
Proline iminopeptidase (332 aa)
   
 
  0.693
R2601_13139
3-oxoadipate enol-lactone hydrolase (262 aa)
   
 
  0.693
R2601_12615
3-oxoadipate enol-lactone hydrolase (262 aa)
   
 
  0.693
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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