STRINGSTRING
R2601_12540 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_12540" - Beta subunit of citrate lyase in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_12540Beta subunit of citrate lyase (319 aa)    
Predicted Functional Partners:
sucC
Succinyl-CoA synthetase subunit beta (397 aa)
       
  0.984
R2601_10779
Uncharacterized protein (343 aa)
 
 
  0.958
R2601_04048
Citryl-CoA lyase (297 aa)
   
   
 
0.923
R2601_06073
Citrate lyase, beta chain (287 aa)
   
   
 
0.918
R2601_14750
NADP-dependent malic enzyme (751 aa)
       
  0.906
R2601_10082
Malic enzyme (759 aa)
       
  0.906
R2601_20019
Putative acyl-CoA dehydrogenase (387 aa)
   
 
  0.895
R2601_03623
Probable acyl-CoA dehydrogenase (395 aa)
   
 
  0.895
R2601_19502
Propionyl-CoA carboxylase, beta subunit (510 aa)
   
 
  0.893
R2601_19539
Propionyl-CoA carboxylase, alpha subunit (666 aa)
   
 
  0.881
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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