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R2601_12550 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_12550" - Sodium/proton:dicarboxylate in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Textmining
[Homology]
Score
R2601_12550Sodium/proton-dicarboxylate (Glutamate) symporter (452 aa)    
Predicted Functional Partners:
hemE
Uroporphyrinogen decarboxylase ; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (343 aa)
         
  0.821
R2601_22412
Triose-phosphate isomerase ; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) (249 aa)
           
  0.821
R2601_00510
Flagellar motor switch protein FliM ; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation (313 aa)
           
  0.821
R2601_00810
Sensor histidine kinase (597 aa)
 
     
  0.558
R2601_14750
NADP-dependent malic enzyme (751 aa)
   
   
  0.527
R2601_10082
Malic enzyme (759 aa)
   
   
  0.527
R2601_24724
Glutamine synthetase (468 aa)
     
   
  0.492
R2601_24460
C4-dicarboxylate transport sensor protein DctB, putative (567 aa)
         
  0.492
R2601_22392
C4-dicarboxylate transport sensor protein (583 aa)
         
  0.492
aroC
5-enolpyruvylshikimate-3-phosphate phospholyase ; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system (366 aa)
              0.451
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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