STRINGSTRING
R2601_12655 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_12655" - Ser/Thr protein phosphatase/nucleotidase, putative in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_12655Ser/Thr protein phosphatase/nucleotidase, putative (519 aa)    
Predicted Functional Partners:
R2601_18258
Adenosine deaminase (333 aa)
 
 
  0.982
R2601_23318
Inosine-5’-monophosphate dehydrogenase (482 aa)
   
 
  0.982
R2601_18825
Transglutaminase-like domain (1142 aa)
       
    0.980
deoD
Purine nucleoside phosphorylase DeoD-type (234 aa)
   
 
    0.977
R2601_18373
Sulfur oxidation protein SoxY (139 aa)
     
  0.890
R2601_17324
2’,3’-cyclic nucleotide 2’-phosphodiesterase/3’-nucleotidase bifunctional periplasmic protein (658 aa)
 
   
0.860
tdk
Thymidine kinase (203 aa)
 
   
  0.836
R2601_04978
Uncharacterized protein (269 aa)
     
  0.824
R2601_04833
Uncharacterized protein (270 aa)
     
  0.824
R2601_18243
Cytidine deaminase (130 aa)
 
 
    0.815
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (6%) [HD]