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R2601_12685 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_12685" - Phenylacetate-CoA ligase, putative in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_12685Phenylacetate-CoA ligase, putative (406 aa)    
Predicted Functional Partners:
R2601_12695
Branched-chain amino acid ABC transporter, ATP-binding protein (274 aa)
   
    0.961
R2601_12705
ABC branched amino acid transporter family, periplasmic substrate-binding subunit (430 aa)
 
          0.924
R2601_12710
Branched-chain amino acid ABC transporter, permease protein (358 aa)
 
          0.912
R2601_12730
AMP-binding enzyme (654 aa)
 
          0.892
R2601_12720
ABC branched amino acid transporter family, inner membrane subunit (317 aa)
 
          0.865
R2601_12725
Branched-chain amino acid ABC transporter, ATP-binding protein (288 aa)
 
          0.859
R2601_12690
RNA 2’,3’-cyclic phosphodiesterase ; Hydrolyzes RNA 2’,3’-cyclic phosphodiester to an RNA 2’- phosphomonoester (186 aa)
              0.825
R2601_18158
Amidase (464 aa)
       
    0.785
R2601_13504
Amidase (475 aa)
       
    0.785
R2601_18553
Enoyl-CoA hydratase/isomerase-3-hydroxyacyl-CoA dehydrogenase, 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein (666 aa)
   
   
  0.729
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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