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R2601_12690 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_12690" - RNA 2',3'-cyclic phosphodiesterase in Pelagibaca bermudensis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
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R2601_12690RNA 2’,3’-cyclic phosphodiesterase ; Hydrolyzes RNA 2’,3’-cyclic phosphodiester to an RNA 2’- phosphomonoester (186 aa)    
Predicted Functional Partners:
R2601_12685
Phenylacetate-CoA ligase, putative (406 aa)
              0.825
R2601_12695
Branched-chain amino acid ABC transporter, ATP-binding protein (274 aa)
              0.723
ispDF
Bifunctional enzyme IspD/IspF ; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF) (378 aa)
              0.554
R2601_27106
ABC transporter, ATP-binding protein (227 aa)
 
          0.552
recA
Protein RecA ; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (213 aa)
     
      0.510
R2601_12705
ABC branched amino acid transporter family, periplasmic substrate-binding subunit (430 aa)
              0.492
R2601_11499
Uncharacterized protein (382 aa)
   
        0.476
R2601_16680
Molybdenum cofactor biosynthesis domain protein (240 aa)
   
        0.460
R2601_26281
Putative competence-damaged inducible protein (159 aa)
              0.451
R2601_26276
Phosphatidylglycerolphosphate phosphatase A ; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) (161 aa)
              0.451
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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