STRINGSTRING
R2601_12745 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_12745" - DNA-binding response regulator in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_12745DNA-binding response regulator (233 aa)    
Predicted Functional Partners:
R2601_12740
Sensory box histidine kinase/response regulator (626 aa)
 
          0.972
R2601_10984
DNA-binding response regulator (142 aa)
   
          0.742
R2601_17584
Diguanylate cyclase (314 aa)
 
          0.721
R2601_14810
Response regulator (415 aa)
   
          0.692
R2601_09787
Cell cycle transcriptional regulator CtrA (231 aa)
   
   
    0.680
R2601_24430
Sensor histidine kinase (426 aa)
   
    0.623
R2601_24909
Phosphate regulon sensor histidine kinase, putative (346 aa)
 
          0.603
R2601_03318
Response Regulator Receiver Signal Transduction Histidine Kinase (130 aa)
 
          0.569
R2601_06993
Sensor histidine kinase (488 aa)
   
    0.547
R2601_19584
Endonuclease/exonuclease/phosphatase family protein (333 aa)
   
          0.484
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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