STRINGSTRING
R2601_12895 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_12895" - Glutathione-dependent formaldehyde-activating, GFA in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_12895Glutathione-dependent formaldehyde-activating, GFA (125 aa)    
Predicted Functional Partners:
R2601_21777
ATP synthase subunit E (382 aa)
       
    0.769
R2601_16625
Uncharacterized protein (153 aa)
   
          0.628
R2601_04943
S-(hydroxymethyl)glutathione dehydrogenase (375 aa)
       
  0.590
R2601_02018
S-(hydroxymethyl)glutathione dehydrogenase (387 aa)
       
  0.590
R2601_12890
Uncharacterized protein (145 aa)
              0.527
R2601_04948
S-formylglutathione hydrolase ; Serine hydrolase involved in the detoxification of formaldehyde (274 aa)
       
    0.478
R2601_20244
Choline dehydrogenase ; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate (552 aa)
   
 
    0.421
R2601_10594
Putative alcohol dehydrogenase protein (526 aa)
   
 
    0.421
R2601_07996
Choline dehydrogenase (513 aa)
   
 
    0.421
R2601_06208
Glucose-methanol-choline oxidoreductase (528 aa)
   
 
    0.421
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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