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rsfS protein (Pelagibaca bermudensis) - STRING interaction network
"rsfS" - Ribosomal silencing factor RsfS in Pelagibaca bermudensis
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second shell of interactors
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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rsfSRibosomal silencing factor RsfS ; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation (123 aa)    
Predicted Functional Partners:
rlmH
rRNA (pseudouridine-N3-)-methyltransferase RlmH ; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA (156 aa)
 
   
  0.948
R2601_14360
NAD(+) synthase (552 aa)
       
    0.815
R2601_25091
Phosphatidate cytidylyltransferase (262 aa)
 
        0.728
R2601_08756
PhoH family protein (326 aa)
 
          0.717
rpmA
50S ribosomal protein L27 (89 aa)
   
   
  0.670
obg
GTP-binding protein Obg ; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control (343 aa)
   
 
  0.607
rplT
50S ribosomal protein L20 ; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (121 aa)
 
        0.606
nadD
Nicotinate mononucleotide adenylyltransferase ; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) (204 aa)
 
   
  0.592
purD
Phosphoribosylglycinamide synthetase (420 aa)
 
          0.575
R2601_10639
Beta-lactamase (625 aa)
   
        0.562
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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