STRINGSTRING
R2601_13005 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_13005" - Two-component response regulator in Pelagibaca bermudensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_13005Two-component response regulator (213 aa)    
Predicted Functional Partners:
R2601_13000
Two-component hybrid sensor and regulator (772 aa)
 
  0.991
R2601_06138
Probable sensor histidine kinase of two-component system (530 aa)
   
 
  0.891
R2601_23333
Sensory box sensor histidine kianse/response regulator (594 aa)
 
   
  0.890
R2601_17589
Two-component hybrid sensor and regulator (654 aa)
 
 
  0.874
R2601_24909
Phosphate regulon sensor histidine kinase, putative (346 aa)
 
 
  0.832
R2601_24460
C4-dicarboxylate transport sensor protein DctB, putative (567 aa)
          0.789
R2601_03318
Response Regulator Receiver Signal Transduction Histidine Kinase (130 aa)
 
   
  0.761
R2601_04848
Putative sensor histidine kinase protein (749 aa)
 
  0.752
R2601_18503
Response regulator (119 aa)
   
     
  0.746
R2601_19989
Sensor histidine kinase (456 aa)
 
   
  0.734
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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