STRINGSTRING
R2601_13074 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_13074" - Surf1 protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_13074Surf1 protein (239 aa)    
Predicted Functional Partners:
R2601_13049
Cytochrome o ubiquinol oxidase subunit II (377 aa)
 
 
  0.926
R2601_13069
Cytochrome o ubiquinol oxidase subunit IV (127 aa)
 
          0.914
R2601_13059
Cytochrome O ubiquinol oxidase subunit I (211 aa)
 
 
  0.909
R2601_13054
Putative cytochrome o ubiquinol oxidase chain I protein (461 aa)
 
 
  0.899
ctaA
Cytochrome aa3-controlling protein ; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group (381 aa)
 
 
  0.895
R2601_13064
Cytochrome c oxidase, subunit III (219 aa)
 
   
  0.884
R2601_23208
Cytochrome-c oxidase chain II/c (319 aa)
   
 
  0.858
ctaB
Heme O synthase ; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group (316 aa)
 
 
  0.802
ctaG
Cytochrome c oxidase assembly protein CtaG ; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I (194 aa)
 
 
  0.789
R2601_09003
Peptidase, M16 family protein (420 aa)
 
      0.784
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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