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R2601_13129 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_13129" - Protocatechuate 3,4-dioxygenase beta subunit in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_13129Protocatechuate 3,4-dioxygenase beta subunit (241 aa)    
Predicted Functional Partners:
R2601_13104
3-carboxy-cis,cis-muconate cycloisomerase (350 aa)
 
 
  0.997
R2601_13124
Protocatechuate 3,4-dioxygenase alpha subunit (230 aa)
 
0.993
R2601_13139
3-oxoadipate enol-lactone hydrolase (262 aa)
 
   
  0.981
R2601_13134
4-carboxymuconolactone decarboxylase (128 aa)
 
   
  0.981
R2601_13109
4-hydroxybenzoate 3-monooxygenase (392 aa)
 
   
    0.950
R2601_12615
3-oxoadipate enol-lactone hydrolase (262 aa)
 
   
  0.869
R2601_13144
Pca operon transcriptional activator PcaQ (175 aa)
 
   
  0.840
R2601_06478
Uncharacterized protein (264 aa)
 
     
  0.792
R2601_13119
Uncharacterized protein (278 aa)
 
          0.790
R2601_21997
Adenylosuccinase (434 aa)
       
  0.700
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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