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R2601_13374 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_13374" - Binding-protein-dependent transport systems inner membrane component in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_13374Binding-protein-dependent transport systems inner membrane component (290 aa)    
Predicted Functional Partners:
R2601_13379
Binding-protein-dependent transport systems inner membrane component (304 aa)
 
    0.999
R2601_13369
Probable binding protein component of ABC sugar transporter (414 aa)
 
 
    0.998
R2601_13384
Putative atp-binding abc transporter protein (365 aa)
 
   
    0.995
R2601_05528
ABC sugar transporter, ATPase subunit (358 aa)
 
   
    0.933
R2601_09512
ABC transporter ATP-binding protein (341 aa)
 
   
    0.920
R2601_24659
ABC alpha-glucoside transporter, ATPase subunit AglK (363 aa)
 
   
    0.913
R2601_00710
Sn-glycerol-3-phosphate import ATP-binding protein UgpC ; Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Responsible for energy coupling to the transport system (350 aa)
 
   
    0.906
R2601_26536
ABC sorbitol/mannitol transporter, ATPase subunit (333 aa)
 
   
    0.900
R2601_20521
Sn-glycerol-3-phosphate import ATP-binding protein UgpC ; Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Responsible for energy coupling to the transport system (357 aa)
 
 
    0.897
R2601_03118
ABC transporter, nucleotide binding/ATPase protein (Sugar) (370 aa)
 
   
    0.868
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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