STRINGSTRING
R2601_13414 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_13414" - Probable phosphotransferase in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_13414Probable phosphotransferase (255 aa)    
Predicted Functional Partners:
R2601_13409
Transcriptional regulator, AraC family protein (288 aa)
              0.859
R2601_23318
Inosine-5’-monophosphate dehydrogenase (482 aa)
   
 
  0.842
R2601_13404
Uncharacterized protein (279 aa)
 
   
  0.798
R2601_13399
Choline/ethanolamine kinase-Aminoglycoside phosphotransferase (316 aa)
   
        0.539
tyrS
Tyrosyl-tRNA synthetase ; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction- tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) (417 aa)
 
        0.537
R2601_13394
Uncharacterized protein (320 aa)
              0.530
R2601_16730
Riboflavin biosynthesis protein (310 aa)
   
        0.525
dxs
1-deoxyxylulose-5-phosphate synthase ; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) (641 aa)
   
        0.503
R2601_27116
Alkaline phosphatase family protein (499 aa)
   
   
    0.500
R2601_22621
L-lactate dehydrogenase, putative (388 aa)
     
 
  0.493
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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