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pyrF protein (Pelagibaca bermudensis) - STRING interaction network
"pyrF" - OMP decarboxylase in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
pyrFOMP decarboxylase ; Catalyzes the decarboxylation of orotidine 5’- monophosphate (OMP) to uridine 5’-monophosphate (UMP) (235 aa)    
Predicted Functional Partners:
pyrE
Orotate phosphoribosyltransferase ; Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) (226 aa)
  0.999
cmk
Cytidine monophosphate kinase (207 aa)
   
 
    0.987
R2601_25116
Uridylate kinase ; Catalyzes the reversible phosphorylation of UMP to UDP (241 aa)
   
 
  0.986
R2601_14240
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) (1110 aa)
 
  0.984
carA
Carbamoyl-phosphate synthetase glutamine chain (379 aa)
 
 
  0.975
R2601_11831
Dihydropyrimidine dehydrogenase (434 aa)
   
  0.966
pyrB
Aspartate transcarbamylase (316 aa)
 
 
  0.965
R2601_13925
Dihydroorotase (427 aa)
 
 
  0.929
R2601_11809
Dihydropyrimidinase (484 aa)
   
 
  0.909
R2601_00595
Dihydropyrimidinase (469 aa)
   
 
  0.909
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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