STRINGSTRING
R2601_13554 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_13554" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_13554Uncharacterized protein (109 aa)    
Predicted Functional Partners:
R2601_21231
Uncharacterized protein (109 aa)
   
          0.675
R2601_08446
Putative phage tail-head adaptor (107 aa)
   
          0.655
mutL
DNA mismatch repair protein MutL ; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex (621 aa)
              0.557
R2601_13559
Uncharacterized protein (377 aa)
              0.546
R2601_18518
Possible flagellar switch protein FliM (396 aa)
   
          0.528
R2601_22272
Uncharacterized protein (290 aa)
   
          0.510
R2601_08426
Uncharacterized protein (66 aa)
   
          0.486
R2601_08441
Uncharacterized protein (135 aa)
   
          0.484
R2601_08451
Uncharacterized protein (197 aa)
   
          0.481
R2601_21587
Uncharacterized protein (268 aa)
   
          0.466
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (9%) [HD]