STRINGSTRING
R2601_13594 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_13594" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_13594Uncharacterized protein (59 aa)    
Predicted Functional Partners:
R2601_13589
Malonate transporter, putative (308 aa)
              0.697
R2601_13584
UPF0178 protein R2601_13584 (150 aa)
              0.697
R2601_13579
HAD-superfamily hydrolase, subfamily IA, variant 1 family protein (206 aa)
              0.697
R2601_13574
Ornithine cyclodeaminase/mu-crystallin family protein (303 aa)
              0.697
R2601_16565
Uncharacterized protein (94 aa)
   
          0.696
R2601_13599
ABC transporter, ATP-binding protein (308 aa)
              0.690
R2601_24554
Cell division protein ZapA ; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division (134 aa)
   
          0.670
R2601_11544
Uncharacterized protein (263 aa)
   
          0.669
R2601_12478
Lipoprotein, putative (161 aa)
   
          0.663
R2601_23338
Uncharacterized protein (198 aa)
   
          0.644
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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