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cobD protein (Pelagibaca bermudensis) - STRING interaction network
"cobD" - Cobalamin biosynthesis protein CobD in Pelagibaca bermudensis
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second shell of interactors
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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cobDCobalamin biosynthesis protein CobD ; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group (311 aa)    
Predicted Functional Partners:
R2601_13714
Cobinamide kinase/cobinamide phosphate guanylyltransferase (168 aa)
 
 
  0.999
cobQ
Cobyric acid synthase ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation (480 aa)
 
 
  0.998
cobT
N(1)-alpha-phosphoribosyltransferase ; Catalyzes the synthesis of alpha-ribazole-5’-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) (339 aa)
 
 
  0.980
R2601_05873
Cob(I)yrinic acid a,c-diamide adenosyltransferase (207 aa)
 
 
  0.976
cobS
Cobalamin-5’-phosphate synthase ; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5’-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5’-phosphate (249 aa)
 
   
  0.963
cobB
Hydrogenobyrinic acid a,c-diamide synthase ; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L-glutamine or ammonia as the nitrogen source (436 aa)
 
 
  0.956
R2601_05908
Precorrin-3B C17-methyltransferase (248 aa)
 
 
  0.954
R2601_05918
Precorrin-6Y C5,15-methyltransferase (Decarboxylating) (403 aa)
 
   
  0.921
R2601_13719
Uncharacterized protein (196 aa)
   
 
  0.914
R2601_05928
Precorrin-4 C11-methyltransferase (262 aa)
 
   
  0.897
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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