STRINGSTRING
R2601_13744 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_13744" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_13744Uncharacterized protein (234 aa)    
Predicted Functional Partners:
R2601_13749
Nitroreductase family protein (192 aa)
              0.866
R2601_13644
Uncharacterized protein (679 aa)
   
          0.700
ftsQ
Cell division protein FtsQ ; Essential cell division protein (299 aa)
   
          0.694
R2601_16880
Sensor histidine kinase ChvG (576 aa)
 
          0.692
R2601_16845
Uncharacterized protein (271 aa)
   
          0.681
R2601_09078
Lipoprotein, putative (286 aa)
   
          0.653
R2601_09977
Uncharacterized protein (396 aa)
   
          0.649
R2601_15292
ABC transporter, permease protein (841 aa)
   
          0.643
R2601_13754
UPF0235 protein R2601_13754 (85 aa)
              0.637
R2601_17849
Phasin, PhaP (148 aa)
   
          0.637
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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