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R2601_13865 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_13865" - L-threonylcarbamoyladenylate synthase in Pelagibaca bermudensis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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R2601_13865L-threonylcarbamoyladenylate synthase ; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine (318 aa)    
Predicted Functional Partners:
R2601_13860
Acyl-CoA dehydrogenase family protein (566 aa)
              0.778
R2601_21086
Hydrolase, TatD family protein (268 aa)
 
   
  0.741
R2601_13855
Metallo-beta-lactamase family protein (342 aa)
   
        0.652
R2601_23323
Possible NOL1/NOP2/sun family protein (384 aa)
 
      0.634
topA
DNA topoisomerase I ; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (906 aa)
         
  0.609
prfA
Peptide chain release factor 1 ; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA (349 aa)
   
   
  0.576
aroE
Shikimate dehydrogenase (NADP(+)) ; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) (276 aa)
   
      0.572
R2601_03568
Putative shikimate 5-dehydrogenase (238 aa)
   
      0.572
R2601_00635
SHIKIMATE 5-DEHYDROGENASE (281 aa)
   
      0.572
metG
Methionyl-tRNA synthetase ; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (570 aa)
   
        0.569
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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