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R2601_13905 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_13905" - Uracil-DNA glycosylase in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
R2601_13905Uracil-DNA glycosylase (264 aa)    
Predicted Functional Partners:
R2601_13895
Molybdenum cofactor biosynthesis protein B ; May be involved in the biosynthesis of molybdopterin (180 aa)
              0.790
R2601_13900
Uncharacterized protein (177 aa)
              0.768
pyrB
Aspartate transcarbamylase (316 aa)
 
          0.625
argD
Acetylornithine aminotransferase (398 aa)
       
    0.613
argB
NAG kinase (297 aa)
       
    0.565
R2601_19145
Ornithine carbamoyltransferase ; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline (308 aa)
       
    0.558
R2601_24734
Nicotinamide nucleotide repair protein ; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration (536 aa)
              0.550
R2601_13920
Uncharacterized protein (134 aa)
              0.535
R2601_10112
Uncharacterized protein (287 aa)
 
          0.532
R2601_13890
Efflux transporter, RND family, MFP subunit (487 aa)
              0.532
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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