STRINGSTRING
R2601_13915 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_13915" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_13915Uncharacterized protein (182 aa)    
Predicted Functional Partners:
pyrB
Aspartate transcarbamylase (316 aa)
              0.872
R2601_13920
Uncharacterized protein (134 aa)
              0.863
R2601_11274
Uncharacterized protein (223 aa)
   
          0.768
R2601_26861
Uncharacterized protein (187 aa)
   
          0.766
R2601_07821
Cytochrome c family protein (135 aa)
   
          0.749
R2601_18518
Possible flagellar switch protein FliM (396 aa)
   
          0.732
R2601_21637
Uncharacterized protein (309 aa)
   
          0.723
R2601_16987
Uncharacterized protein (287 aa)
   
          0.718
R2601_13845
Lipoprotein, putative (221 aa)
   
          0.708
R2601_17699
Cytochrome c family protein (138 aa)
   
          0.699
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (6%) [HD]